Building datasets for plotting

Functions that setup data structure

manhattanr()

Creates a manhattanr object

qqr()

Creates a qq object

volcanor()

Creates a volcano object

Plotting functions

Main functions for plotting

manhattanly()

Creates a plotly manhattan plot

qqly()

Creates a plotly Q-Q plot

volcanoly()

Creates a plotly volcano plot

Datasets

Datasets that ship with the package to illustrate usage

HapMap

Subset of HapMap data with simulated GWAS results

significantSNP

Character vector of SNPs to highlight